Show SIM4 / tBLASTn alignment result

PARAMETERS:
Query Sequence ID: AL048607.1
Subject Sequence ID: ENSG00000017427
Subject Sequence type: 1


seq1 = /RAID/mart2/Splice/web_temp/fasta/AL048607.1, 611 bp
seq2 = /RAID/mart2/Splice/web_temp/fasta/ENSG00000017427 (ENSG00000017427), 78292 bp

>gi|4727415|gb|AL048607.1|AL048607 DKFZp586O032_s1 586 (synonym: hute1) Homo sapiens cDNA clone DKFZp586O032, mRNA sequence
>ENSG00000017427

1-23  (21979-22000)   82% ==
140-445  (49722-50024)   85%

      0     .    :    .    :
      1 GGCCGCCCTTTTTTTTTTTTTTT
         |  -||||||||||||||||||
  21979 TGAT CCCTTTTTTTTTTTTTTT

      0     .    :    .    :    .    :    .    :    .    :
    140 ACATGGGCAGGGTGTGGTGGCTCATGCCTGTAATCCCAGCAATTTGGGAG
        || | ||| ||| | ||||||||| |||||||||||||||| ||||||||
  49722 ACTTCGGCCGGGCGCGGTGGCTCACGCCTGTAATCCCAGCACTTTGGGAG

     50     .    :    .    :    .    :    .    :    .    :
    190 GCTGAGGCGGGCAAATCACAAGGTCAGGAGTTTGAGACCAACCTGGCCAA
        || |||||||||  ||||| |||| || || |  |||||| |||||| ||
  49772 GCCGAGGCGGGCGGATCACGAGGTTAGAAGATCAAGACCATCCTGGCTAA

    100     .    :    .    :    .    :    .    :    .    :
    240 CATGGTAAAACCCCGTCTCTATTAAAAATCCAAAAAATTAGCCGGGCATA
        || ||| |||||||||||||| ||||||| ||||||||||||||||| | 
  49822 CACGGTGAAACCCCGTCTCTACTAAAAATACAAAAAATTAGCCGGGCGTG

    150     .    :    .    :    .    :    .    :    .    :
    290 GTGGTGGGTGCCTGTAATCCCAGCTACTCAGGAGGCTGAGGCAGGAGAAT
        || | ||| ||||||| |||||||||||| ||||||||||||||||||||
  49872 GTAGCGGGCGCCTGTAGTCCCAGCTACTCGGGAGGCTGAGGCAGGAGAAT

    200     .    :    .    :    .    :    .    :    .    :
    340 CGCTTAAACCCAGGAGGTGGAGGTTGCAGTGAGCCGAGATCATGCCACTG
         || | ||||| ||||| |||| ||||||||||||||||||  |||||||
  49922 GGCGTGAACCCGGGAGGCGGAGCTTGCAGTGAGCCGAGATCGCGCCACTG

    250     .    :    .    :    .    :    .    :    .    :
    390 CACTCCAGCCTGGGGGACAGTGCGAGACCCCATCTCACAAAAAGGAAAAA
        |||||||||||||| ||||| ||||||| || |||||-|||||--|||||
  49972 CACTCCAGCCTGGGCGACAGAGCGAGACTCCGTCTCA AAAAA  AAAAA

    300     .
    440 AAAAAA
        ||||||
  50019 AAAAAA

END