Show SIM4 / tBLASTn alignment result

PARAMETERS:
Query Sequence ID: Q92897
Subject Sequence ID: ENSG00000012048
Subject Sequence type: 3

Query= tr|Q92897|Q92897_HUMAN BRCA1 (Fragment) - Homo sapiens (Human).
         (26 letters)

>ENSG00000012048
          Length = 81091

 Score = 53.5 bits (127), Expect = 6e-11
 Identities = 26/26 (100%), Positives = 26/26 (100%)
 Frame = -3

Query: 1     MDLSALRVEEVQNVINAMQKILECPI 26
             MDLSALRVEEVQNVINAMQKILECPI
Sbjct: 79796 MDLSALRVEEVQNVINAMQKILECPI 79719



 Score = 17.7 bits (34), Expect = 3.4
 Identities = 7/22 (31%), Positives = 13/22 (59%)
 Frame = -3

Query: 4    SALRVEEVQNVINAMQKILECP 25
            + L+ ++  NVI   +K + CP
Sbjct: 6632 TTLQTKQHLNVILWQKKTIPCP 6567


Lambda     K      H
   0.322    0.135    0.359 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 1360
Number of Sequences: 0
Number of extensions: 4
Number of successful extensions: 2
Number of sequences better than 10.0: 2
Number of HSP's better than 10.0 without gapping: 1
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 2
length of query: 26
length of database: 27,030
effective HSP length: 2
effective length of query: 24
effective length of database: 27,028
effective search space:   648672
effective search space used:   648672
frameshift window, decay const: 50,  0.1
T: 13
A: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 30 (16.8 bits)
S2: 30 (16.2 bits)

END